Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Gm6218-201ENSMUST00000219812 628 ntBASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Gm28760-201ENSMUST00000185995 736 ntBASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Gm10576-201ENSMUST00000191927 825 ntBASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Gm5279-201ENSMUST00000199575 745 ntBASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 AC154595.3-201ENSMUST00000224579 384 ntBASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.73■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.73■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Atg4a-psA0A0G2JFS9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atg4a-psA0A0G2JFS9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.73■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.73■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.73■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Gm44855-201ENSMUST00000205725 362 ntBASIC16.73■□□□□ 0.27
Atg4a-psA0A0G2JFS9 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.73■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Atg4a-psA0A0G2JFS9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.72■□□□□ 0.27
Atg4a-psA0A0G2JFS9 AC154725.1-201ENSMUST00000224826 1961 ntBASIC16.72■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Gm15376-201ENSMUST00000122258 783 ntBASIC16.72■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.72■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.72■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.72■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Gm43094-201ENSMUST00000196549 921 ntBASIC16.72■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Gm7730-201ENSMUST00000212486 454 ntBASIC16.72■□□□□ 0.27
Atg4a-psA0A0G2JFS9 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms