Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav7n-4A0A075B620 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Gm37500-201ENSMUST00000192059 1443 ntBASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 AA414768-201ENSMUST00000121924 1257 ntBASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Gm13830-205ENSMUST00000201195 1155 ntBASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Gm43935-201ENSMUST00000203569 1050 ntBASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Otx2os1-206ENSMUST00000228153 787 ntBASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trav7n-4A0A075B620 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Gm5366-201ENSMUST00000215494 1338 ntBASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Gm12895-201ENSMUST00000122214 226 ntBASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Syt7-205ENSMUST00000224135 1557 ntBASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav7n-4A0A075B620 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms