Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trem1Q9JKE2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.37□□□□□ -0.43
Trem1Q9JKE2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.37□□□□□ -0.43
Trem1Q9JKE2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trem1Q9JKE2 Gm43767-201ENSMUST00000198933 381 ntBASIC12.37□□□□□ -0.43
Trem1Q9JKE2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trem1Q9JKE2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trem1Q9JKE2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trem1Q9JKE2 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trem1Q9JKE2 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Trem1Q9JKE2 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Trem1Q9JKE2 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trem1Q9JKE2 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trem1Q9JKE2 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trem1Q9JKE2 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trem1Q9JKE2 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
Trem1Q9JKE2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trem1Q9JKE2 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trem1Q9JKE2 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trem1Q9JKE2 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.37□□□□□ -0.43
Trem1Q9JKE2 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trem1Q9JKE2 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.37□□□□□ -0.43
Trem1Q9JKE2 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trem1Q9JKE2 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.37□□□□□ -0.43
Trem1Q9JKE2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trem1Q9JKE2 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trem1Q9JKE2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Gm8097-201ENSMUST00000117903 829 ntBASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trem1Q9JKE2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.35□□□□□ -0.43
Trem1Q9JKE2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trem1Q9JKE2 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms