Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Gm13323-201ENSMUST00000120245 1151 ntBASIC12.97□□□□□ -0.33
Rtp4Q9ER80 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 AA619741-201ENSMUST00000195095 646 ntBASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Gm6916-202ENSMUST00000205523 195 ntBASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Gm7653-201ENSMUST00000214567 508 ntBASIC12.97□□□□□ -0.33
Rtp4Q9ER80 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rtp4Q9ER80 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Gm22189-201ENSMUST00000103822 86 ntBASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Gm10275-202ENSMUST00000168697 495 ntBASIC12.96□□□□□ -0.33
Rtp4Q9ER80 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.96□□□□□ -0.33
Rtp4Q9ER80 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Gm10275-201ENSMUST00000092620 635 ntBASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rtp4Q9ER80 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rtp4Q9ER80 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.96□□□□□ -0.34
Rtp4Q9ER80 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rtp4Q9ER80 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rtp4Q9ER80 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Rtp4Q9ER80 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Rtp4Q9ER80 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rtp4Q9ER80 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rtp4Q9ER80 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rtp4Q9ER80 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rtp4Q9ER80 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rtp4Q9ER80 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rtp4Q9ER80 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rtp4Q9ER80 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rtp4Q9ER80 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rtp4Q9ER80 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rtp4Q9ER80 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rtp4Q9ER80 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rtp4Q9ER80 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rtp4Q9ER80 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rtp4Q9ER80 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rtp4Q9ER80 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Rtp4Q9ER80 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rtp4Q9ER80 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rtp4Q9ER80 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rtp4Q9ER80 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rtp4Q9ER80 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.95□□□□□ -0.34
Rtp4Q9ER80 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.95□□□□□ -0.34
Rtp4Q9ER80 Gm9794-201ENSMUST00000202370 423 ntBASIC12.95□□□□□ -0.34
Rtp4Q9ER80 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rtp4Q9ER80 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.95□□□□□ -0.34
Rtp4Q9ER80 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.95□□□□□ -0.34
Rtp4Q9ER80 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rtp4Q9ER80 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms