Protein–RNA interactions for Protein: Q9ER42

Barx1, Homeobox protein BarH-like 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Barx1Q9ER42 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.5□□□□□ -0.41
Barx1Q9ER42 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Gm6983-201ENSMUST00000214912 628 ntBASIC12.5□□□□□ -0.41
Barx1Q9ER42 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.5□□□□□ -0.41
Barx1Q9ER42 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.5□□□□□ -0.41
Barx1Q9ER42 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.5□□□□□ -0.41
Barx1Q9ER42 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Barx1Q9ER42 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.49□□□□□ -0.41
Barx1Q9ER42 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Barx1Q9ER42 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Gm27572-201ENSMUST00000183702 255 ntBASIC12.49□□□□□ -0.41
Barx1Q9ER42 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.49□□□□□ -0.41
Barx1Q9ER42 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.49□□□□□ -0.41
Barx1Q9ER42 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Barx1Q9ER42 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Barx1Q9ER42 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Barx1Q9ER42 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Barx1Q9ER42 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Barx1Q9ER42 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Barx1Q9ER42 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Barx1Q9ER42 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Barx1Q9ER42 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.48□□□□□ -0.41
Barx1Q9ER42 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Barx1Q9ER42 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Barx1Q9ER42 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Barx1Q9ER42 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Barx1Q9ER42 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms