Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2aQ9DB34 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2aQ9DB34 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2aQ9DB34 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2aQ9DB34 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2aQ9DB34 Gm14719-201ENSMUST00000121891 340 ntBASIC14.45□□□□□ -0.1
Chmp2aQ9DB34 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2aQ9DB34 Gm16215-201ENSMUST00000161990 637 ntBASIC14.45□□□□□ -0.1
Chmp2aQ9DB34 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Chmp2aQ9DB34 Gm9522-201ENSMUST00000182394 926 ntBASIC14.45□□□□□ -0.1
Chmp2aQ9DB34 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.45□□□□□ -0.1
Chmp2aQ9DB34 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.45□□□□□ -0.1
Chmp2aQ9DB34 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2aQ9DB34 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2aQ9DB34 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.45□□□□□ -0.1
Chmp2aQ9DB34 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.45□□□□□ -0.1
Chmp2aQ9DB34 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2aQ9DB34 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2aQ9DB34 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Chmp2aQ9DB34 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Chmp2aQ9DB34 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2aQ9DB34 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2aQ9DB34 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp2aQ9DB34 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Mir6977-201ENSMUST00000184960 64 ntBASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Gm20445-201ENSMUST00000061905 565 ntBASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Chmp2aQ9DB34 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Gm12585-201ENSMUST00000117307 290 ntBASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Gm29667-201ENSMUST00000190817 490 ntBASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp2aQ9DB34 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2aQ9DB34 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2aQ9DB34 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.42□□□□□ -0.1
Chmp2aQ9DB34 Syt7-204ENSMUST00000223586 1344 ntBASIC14.42□□□□□ -0.1
Chmp2aQ9DB34 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2aQ9DB34 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2aQ9DB34 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Chmp2aQ9DB34 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2aQ9DB34 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Chmp2aQ9DB34 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2aQ9DB34 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp2aQ9DB34 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms