Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.04■□□□□ -0
Ssr1Q9CY50 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ssr1Q9CY50 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ssr1Q9CY50 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ssr1Q9CY50 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ssr1Q9CY50 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ssr1Q9CY50 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ssr1Q9CY50 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ssr1Q9CY50 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ssr1Q9CY50 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ssr1Q9CY50 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC15.03■□□□□ -0
Ssr1Q9CY50 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Ssr1Q9CY50 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.03■□□□□ -0
Ssr1Q9CY50 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.03■□□□□ -0
Ssr1Q9CY50 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ssr1Q9CY50 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Gm27525-201ENSMUST00000184465 107 ntBASIC15.03■□□□□ -0
Ssr1Q9CY50 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.03■□□□□ -0
Ssr1Q9CY50 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.03■□□□□ -0
Ssr1Q9CY50 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ssr1Q9CY50 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Ssr1Q9CY50 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Ssr1Q9CY50 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssr1Q9CY50 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ssr1Q9CY50 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ssr1Q9CY50 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ssr1Q9CY50 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ssr1Q9CY50 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.02■□□□□ -0
Ssr1Q9CY50 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ssr1Q9CY50 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ssr1Q9CY50 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ssr1Q9CY50 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.02■□□□□ -0
Ssr1Q9CY50 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Ssr1Q9CY50 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.02■□□□□ -0
Ssr1Q9CY50 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ssr1Q9CY50 Rprl2-201ENSMUST00000157150 290 ntBASIC15.02■□□□□ -0
Ssr1Q9CY50 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.02■□□□□ -0
Ssr1Q9CY50 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.02■□□□□ -0
Ssr1Q9CY50 Gm6443-201ENSMUST00000203599 874 ntBASIC15.02■□□□□ -0
Ssr1Q9CY50 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.02■□□□□ -0
Ssr1Q9CY50 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ssr1Q9CY50 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ssr1Q9CY50 Gm10175-201ENSMUST00000086013 645 ntBASIC15.02■□□□□ -0
Ssr1Q9CY50 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ssr1Q9CY50 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ssr1Q9CY50 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ssr1Q9CY50 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ssr1Q9CY50 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ssr1Q9CY50 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ssr1Q9CY50 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ssr1Q9CY50 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.02□□□□□ -0.01
Ssr1Q9CY50 Paupar-201ENSMUST00000194826 3482 ntBASIC15.02□□□□□ -0.01
Ssr1Q9CY50 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Ssr1Q9CY50 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.02□□□□□ -0.01
Ssr1Q9CY50 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ssr1Q9CY50 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ssr1Q9CY50 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ssr1Q9CY50 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Ssr1Q9CY50 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ssr1Q9CY50 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms