Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nip7Q9CXK8 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nip7Q9CXK8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Nip7Q9CXK8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nip7Q9CXK8 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nip7Q9CXK8 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nip7Q9CXK8 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC17.12■□□□□ 0.33
Nip7Q9CXK8 Gm42929-201ENSMUST00000198374 1286 ntBASIC17.12■□□□□ 0.33
Nip7Q9CXK8 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC17.12■□□□□ 0.33
Nip7Q9CXK8 AC154276.1-201ENSMUST00000228874 1299 ntBASIC17.12■□□□□ 0.33
Nip7Q9CXK8 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nip7Q9CXK8 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nip7Q9CXK8 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nip7Q9CXK8 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nip7Q9CXK8 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nip7Q9CXK8 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nip7Q9CXK8 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nip7Q9CXK8 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nip7Q9CXK8 Gm20632-201ENSMUST00000176760 2427 ntBASIC17.12■□□□□ 0.33
Nip7Q9CXK8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nip7Q9CXK8 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nip7Q9CXK8 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nip7Q9CXK8 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nip7Q9CXK8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Gm12537-201ENSMUST00000119266 1002 ntBASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Gm12070-201ENSMUST00000119551 1002 ntBASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Gm12671-201ENSMUST00000119978 1002 ntBASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Gm13292-201ENSMUST00000120014 1000 ntBASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Gm12403-201ENSMUST00000121384 959 ntBASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Gm10359-201ENSMUST00000180167 1002 ntBASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Gm12033-201ENSMUST00000180654 1002 ntBASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Gm5559-201ENSMUST00000180755 1002 ntBASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Gm4335-201ENSMUST00000182581 1004 ntBASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Gm38144-201ENSMUST00000192790 465 ntBASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nip7Q9CXK8 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nip7Q9CXK8 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nip7Q9CXK8 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nip7Q9CXK8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nip7Q9CXK8 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nip7Q9CXK8 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nip7Q9CXK8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Nip7Q9CXK8 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC17.1■□□□□ 0.33
Nip7Q9CXK8 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nip7Q9CXK8 Gm12020-201ENSMUST00000119030 2042 ntBASIC17.1■□□□□ 0.33
Nip7Q9CXK8 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Nip7Q9CXK8 Gm11400-201ENSMUST00000120853 1214 ntBASIC17.1■□□□□ 0.33
Nip7Q9CXK8 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC17.1■□□□□ 0.33
Nip7Q9CXK8 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nip7Q9CXK8 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nip7Q9CXK8 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nip7Q9CXK8 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nip7Q9CXK8 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nip7Q9CXK8 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nip7Q9CXK8 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nip7Q9CXK8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Nip7Q9CXK8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Nip7Q9CXK8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nip7Q9CXK8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms