Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Gm18905-201ENSMUST00000205454 928 ntBASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.1□□□□□ -0.31
Otud1Q9CUB6 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Gm12341-201ENSMUST00000119724 503 ntBASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Gm5354-201ENSMUST00000182417 973 ntBASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Gm37744-201ENSMUST00000194616 1590 ntBASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Gm18018-201ENSMUST00000198273 408 ntBASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.09□□□□□ -0.31
Otud1Q9CUB6 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.09□□□□□ -0.31
Otud1Q9CUB6 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.09□□□□□ -0.31
Otud1Q9CUB6 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.09□□□□□ -0.31
Otud1Q9CUB6 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Otud1Q9CUB6 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Otud1Q9CUB6 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Otud1Q9CUB6 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Gm15678-201ENSMUST00000117573 960 ntBASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Gm8515-201ENSMUST00000194852 576 ntBASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Gm5425-201ENSMUST00000214125 459 ntBASIC13.08□□□□□ -0.32
Otud1Q9CUB6 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Otud1Q9CUB6 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Otud1Q9CUB6 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.07□□□□□ -0.32
Otud1Q9CUB6 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Otud1Q9CUB6 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms