Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Olfr129-201ENSMUST00000122318 993 ntBASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Gm5712-201ENSMUST00000199748 1043 ntBASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 AC153881.2-201ENSMUST00000214877 204 ntBASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 AC131690.1-201ENSMUST00000218406 374 ntBASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39lQ9CQD0 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Gm2308-201ENSMUST00000166539 1004 ntBASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 AC126549.2-201ENSMUST00000223997 1976 ntBASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39lQ9CQD0 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rpl39lQ9CQD0 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rpl39lQ9CQD0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
Rpl39lQ9CQD0 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Rpl39lQ9CQD0 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Rpl39lQ9CQD0 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rpl39lQ9CQD0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rpl39lQ9CQD0 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms