Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ska1Q9CPV1 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Ska1Q9CPV1 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ska1Q9CPV1 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ska1Q9CPV1 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Ska1Q9CPV1 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ska1Q9CPV1 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.07□□□□□ -0.32
Ska1Q9CPV1 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ska1Q9CPV1 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ska1Q9CPV1 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ska1Q9CPV1 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ska1Q9CPV1 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
Ska1Q9CPV1 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.07□□□□□ -0.32
Ska1Q9CPV1 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.07□□□□□ -0.32
Ska1Q9CPV1 Gm6443-201ENSMUST00000203599 874 ntBASIC13.07□□□□□ -0.32
Ska1Q9CPV1 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ska1Q9CPV1 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.07□□□□□ -0.32
Ska1Q9CPV1 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ska1Q9CPV1 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ska1Q9CPV1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.07□□□□□ -0.32
Ska1Q9CPV1 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ska1Q9CPV1 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ska1Q9CPV1 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ska1Q9CPV1 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ska1Q9CPV1 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ska1Q9CPV1 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ska1Q9CPV1 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Gm11779-201ENSMUST00000118541 368 ntBASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Gm45612-201ENSMUST00000211320 160 ntBASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ska1Q9CPV1 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Gm14494-201ENSMUST00000118786 435 ntBASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Gm8000-201ENSMUST00000188378 592 ntBASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Ska1Q9CPV1 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms