Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim16Q99PP9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trim16Q99PP9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Gm22175-201ENSMUST00000175007 78 ntBASIC13.55□□□□□ -0.24
Trim16Q99PP9 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim16Q99PP9 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim16Q99PP9 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.55□□□□□ -0.24
Trim16Q99PP9 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.55□□□□□ -0.24
Trim16Q99PP9 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.55□□□□□ -0.24
Trim16Q99PP9 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim16Q99PP9 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.55□□□□□ -0.24
Trim16Q99PP9 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim16Q99PP9 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trim16Q99PP9 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Gm6222-201ENSMUST00000120787 396 ntBASIC13.54□□□□□ -0.24
Trim16Q99PP9 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Gm28630-201ENSMUST00000187806 498 ntBASIC13.54□□□□□ -0.24
Trim16Q99PP9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trim16Q99PP9 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.54□□□□□ -0.24
Trim16Q99PP9 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim16Q99PP9 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.54□□□□□ -0.24
Trim16Q99PP9 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim16Q99PP9 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim16Q99PP9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
Trim16Q99PP9 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.53□□□□□ -0.24
Trim16Q99PP9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim16Q99PP9 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim16Q99PP9 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim16Q99PP9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim16Q99PP9 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim16Q99PP9 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim16Q99PP9 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim16Q99PP9 Gm5566-201ENSMUST00000116118 459 ntBASIC13.53□□□□□ -0.24
Trim16Q99PP9 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim16Q99PP9 Gm9719-201ENSMUST00000162765 543 ntBASIC13.53□□□□□ -0.24
Trim16Q99PP9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim16Q99PP9 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim16Q99PP9 Gm27430-201ENSMUST00000184585 107 ntBASIC13.53□□□□□ -0.24
Trim16Q99PP9 Gm44333-201ENSMUST00000197168 107 ntBASIC13.53□□□□□ -0.24
Trim16Q99PP9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim16Q99PP9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim16Q99PP9 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim16Q99PP9 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms