Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Cstf3Q99LI7 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf3Q99LI7 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf3Q99LI7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf3Q99LI7 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Cstf3Q99LI7 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf3Q99LI7 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf3Q99LI7 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf3Q99LI7 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.39□□□□□ -0.27
Cstf3Q99LI7 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.39□□□□□ -0.27
Cstf3Q99LI7 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf3Q99LI7 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf3Q99LI7 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.39□□□□□ -0.27
Cstf3Q99LI7 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.39□□□□□ -0.27
Cstf3Q99LI7 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf3Q99LI7 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf3Q99LI7 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf3Q99LI7 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf3Q99LI7 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cstf3Q99LI7 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf3Q99LI7 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf3Q99LI7 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf3Q99LI7 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf3Q99LI7 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf3Q99LI7 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cstf3Q99LI7 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf3Q99LI7 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf3Q99LI7 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Gm29741-201ENSMUST00000192667 421 ntBASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Gm37714-201ENSMUST00000194742 342 ntBASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf3Q99LI7 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Gm24543-201ENSMUST00000103867 82 ntBASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Gm37935-201ENSMUST00000192012 982 ntBASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Gm7774-201ENSMUST00000200064 533 ntBASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Gm5312-201ENSMUST00000203728 547 ntBASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.37□□□□□ -0.27
Cstf3Q99LI7 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.37□□□□□ -0.27
Cstf3Q99LI7 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.37□□□□□ -0.27
Cstf3Q99LI7 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms