Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Gm29541-201ENSMUST00000191351 678 ntBASIC12.61□□□□□ -0.39
Lims1Q99JW4 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.61□□□□□ -0.39
Lims1Q99JW4 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lims1Q99JW4 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.6□□□□□ -0.39
Lims1Q99JW4 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Gm5566-201ENSMUST00000116118 459 ntBASIC12.6□□□□□ -0.39
Lims1Q99JW4 Gm12428-201ENSMUST00000119844 727 ntBASIC12.6□□□□□ -0.39
Lims1Q99JW4 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Gm9824-201ENSMUST00000178707 561 ntBASIC12.6□□□□□ -0.39
Lims1Q99JW4 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.6□□□□□ -0.39
Lims1Q99JW4 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.6□□□□□ -0.39
Lims1Q99JW4 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.6□□□□□ -0.39
Lims1Q99JW4 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lims1Q99JW4 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Lims1Q99JW4 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Mir698-201ENSMUST00000102164 109 ntBASIC12.59□□□□□ -0.39
Lims1Q99JW4 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.59□□□□□ -0.39
Lims1Q99JW4 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lims1Q99JW4 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.59□□□□□ -0.39
Lims1Q99JW4 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms