Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
Cdk9Q99J95 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.95□□□□□ -0.18
Cdk9Q99J95 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.95□□□□□ -0.18
Cdk9Q99J95 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk9Q99J95 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk9Q99J95 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk9Q99J95 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk9Q99J95 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.94□□□□□ -0.18
Cdk9Q99J95 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Gm8000-201ENSMUST00000188378 592 ntBASIC13.94□□□□□ -0.18
Cdk9Q99J95 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.94□□□□□ -0.18
Cdk9Q99J95 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.94□□□□□ -0.18
Cdk9Q99J95 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk9Q99J95 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cdk9Q99J95 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk9Q99J95 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk9Q99J95 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk9Q99J95 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk9Q99J95 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk9Q99J95 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.93□□□□□ -0.18
Cdk9Q99J95 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk9Q99J95 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk9Q99J95 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.93□□□□□ -0.18
Cdk9Q99J95 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk9Q99J95 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk9Q99J95 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cdk9Q99J95 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk9Q99J95 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.93□□□□□ -0.18
Cdk9Q99J95 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Cdk9Q99J95 Gm13597-201ENSMUST00000121239 375 ntBASIC13.93□□□□□ -0.18
Cdk9Q99J95 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk9Q99J95 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk9Q99J95 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk9Q99J95 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk9Q99J95 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk9Q99J95 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk9Q99J95 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk9Q99J95 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk9Q99J95 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk9Q99J95 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk9Q99J95 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk9Q99J95 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.93□□□□□ -0.18
Cdk9Q99J95 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk9Q99J95 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdk9Q99J95 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Gm11779-201ENSMUST00000118541 368 ntBASIC13.92□□□□□ -0.18
Cdk9Q99J95 Gm5479-201ENSMUST00000160578 435 ntBASIC13.92□□□□□ -0.18
Cdk9Q99J95 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.92□□□□□ -0.18
Cdk9Q99J95 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms