Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm9229-201ENSMUST00000222777 126 ntBASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Gm37082-201ENSMUST00000192629 1927 ntBASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Gm9575-201ENSMUST00000122140 1339 ntBASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Gm14908-201ENSMUST00000120930 1286 ntBASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Gm14957-201ENSMUST00000121069 817 ntBASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Gm6918-201ENSMUST00000167622 1222 ntBASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Gm3436-201ENSMUST00000179930 840 ntBASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Gm43149-201ENSMUST00000198162 1422 ntBASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb20Q91XZ9 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb20Q91XZ9 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Gm44509-201ENSMUST00000205400 1324 ntBASIC13.67□□□□□ -0.22
Pcdhb20Q91XZ9 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms