Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Gm9723-201ENSMUST00000192100 457 ntBASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pcdhb3Q91XZ7 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.19
Pcdhb3Q91XZ7 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
Pcdhb3Q91XZ7 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Pcdhb3Q91XZ7 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.9□□□□□ -0.19
Pcdhb3Q91XZ7 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Gm14201-201ENSMUST00000117627 289 ntBASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Gm26308-201ENSMUST00000157768 69 ntBASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Gm45359-201ENSMUST00000210635 427 ntBASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb3Q91XZ7 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Gm44492-201ENSMUST00000197012 141 ntBASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb3Q91XZ7 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms