Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tram1Q91V04 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tram1Q91V04 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.9□□□□□ -0.5
Tram1Q91V04 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC11.9□□□□□ -0.5
Tram1Q91V04 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.9□□□□□ -0.5
Tram1Q91V04 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tram1Q91V04 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tram1Q91V04 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tram1Q91V04 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tram1Q91V04 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tram1Q91V04 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tram1Q91V04 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tram1Q91V04 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tram1Q91V04 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tram1Q91V04 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tram1Q91V04 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tram1Q91V04 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Tram1Q91V04 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.89□□□□□ -0.51
Tram1Q91V04 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Tram1Q91V04 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Tram1Q91V04 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.89□□□□□ -0.51
Tram1Q91V04 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Tram1Q91V04 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11.89□□□□□ -0.51
Tram1Q91V04 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC11.89□□□□□ -0.51
Tram1Q91V04 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.89□□□□□ -0.51
Tram1Q91V04 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.89□□□□□ -0.51
Tram1Q91V04 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.89□□□□□ -0.51
Tram1Q91V04 Gm17807-201ENSMUST00000186869 298 ntBASIC11.89□□□□□ -0.51
Tram1Q91V04 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC11.89□□□□□ -0.51
Tram1Q91V04 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Gm42670-201ENSMUST00000201816 1292 ntBASIC11.89□□□□□ -0.51
Tram1Q91V04 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.89□□□□□ -0.51
Tram1Q91V04 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Tram1Q91V04 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.89□□□□□ -0.51
Tram1Q91V04 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.89□□□□□ -0.51
Tram1Q91V04 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Tram1Q91V04 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.89□□□□□ -0.51
Tram1Q91V04 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tram1Q91V04 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.88□□□□□ -0.51
Tram1Q91V04 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Tram1Q91V04 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Tram1Q91V04 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.88□□□□□ -0.51
Tram1Q91V04 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Tram1Q91V04 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.88□□□□□ -0.51
Tram1Q91V04 Gm15173-201ENSMUST00000122049 433 ntBASIC11.88□□□□□ -0.51
Tram1Q91V04 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC11.88□□□□□ -0.51
Tram1Q91V04 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Tram1Q91V04 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.88□□□□□ -0.51
Tram1Q91V04 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Tram1Q91V04 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 AC131709.1-201ENSMUST00000224731 1180 ntBASIC11.88□□□□□ -0.51
Tram1Q91V04 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Tram1Q91V04 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tram1Q91V04 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms