Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh18Q8VHR0 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdh18Q8VHR0 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pcdh18Q8VHR0 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh18Q8VHR0 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh18Q8VHR0 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh18Q8VHR0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh18Q8VHR0 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pcdh18Q8VHR0 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh18Q8VHR0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh18Q8VHR0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pcdh18Q8VHR0 Gm14042-201ENSMUST00000120139 833 ntBASIC13.35□□□□□ -0.27
Pcdh18Q8VHR0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.35□□□□□ -0.27
Pcdh18Q8VHR0 Gm6443-201ENSMUST00000203599 874 ntBASIC13.35□□□□□ -0.27
Pcdh18Q8VHR0 AW822252-206ENSMUST00000208904 237 ntBASIC13.35□□□□□ -0.27
Pcdh18Q8VHR0 Gm5364-201ENSMUST00000216789 889 ntBASIC13.35□□□□□ -0.27
Pcdh18Q8VHR0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.35□□□□□ -0.27
Pcdh18Q8VHR0 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdh18Q8VHR0 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh18Q8VHR0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh18Q8VHR0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh18Q8VHR0 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pcdh18Q8VHR0 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh18Q8VHR0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdh18Q8VHR0 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh18Q8VHR0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh18Q8VHR0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh18Q8VHR0 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Gm9385-201ENSMUST00000117563 472 ntBASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Gm9727-201ENSMUST00000161387 555 ntBASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Gm25927-201ENSMUST00000175058 117 ntBASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Gm43514-201ENSMUST00000198852 424 ntBASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Gm45747-201ENSMUST00000212203 999 ntBASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh18Q8VHR0 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms