Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rpap2Q8VC34 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rpap2Q8VC34 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.17■□□□□ 0.02
Rpap2Q8VC34 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.17■□□□□ 0.02
Rpap2Q8VC34 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpap2Q8VC34 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rpap2Q8VC34 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpap2Q8VC34 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Rpap2Q8VC34 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpap2Q8VC34 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpap2Q8VC34 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpap2Q8VC34 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpap2Q8VC34 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpap2Q8VC34 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpap2Q8VC34 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpap2Q8VC34 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpap2Q8VC34 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpap2Q8VC34 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpap2Q8VC34 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpap2Q8VC34 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rpap2Q8VC34 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpap2Q8VC34 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpap2Q8VC34 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rpap2Q8VC34 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rpap2Q8VC34 Gm17795-201ENSMUST00000214505 757 ntBASIC15.16■□□□□ 0.02
Rpap2Q8VC34 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpap2Q8VC34 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpap2Q8VC34 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpap2Q8VC34 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rpap2Q8VC34 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpap2Q8VC34 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpap2Q8VC34 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.16■□□□□ 0.02
Rpap2Q8VC34 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpap2Q8VC34 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpap2Q8VC34 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Rpap2Q8VC34 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rpap2Q8VC34 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpap2Q8VC34 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rpap2Q8VC34 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Rpap2Q8VC34 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.16■□□□□ 0.02
Rpap2Q8VC34 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpap2Q8VC34 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.15■□□□□ 0.02
Rpap2Q8VC34 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpap2Q8VC34 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpap2Q8VC34 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpap2Q8VC34 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.14■□□□□ 0.01
Rpap2Q8VC34 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Rpap2Q8VC34 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpap2Q8VC34 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpap2Q8VC34 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpap2Q8VC34 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
Rpap2Q8VC34 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rpap2Q8VC34 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.14■□□□□ 0.01
Rpap2Q8VC34 Gm9797-201ENSMUST00000052902 613 ntBASIC15.14■□□□□ 0.01
Rpap2Q8VC34 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.14■□□□□ 0.01
Rpap2Q8VC34 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpap2Q8VC34 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rpap2Q8VC34 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rpap2Q8VC34 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpap2Q8VC34 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rpap2Q8VC34 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rpap2Q8VC34 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpap2Q8VC34 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms