Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Gm44719-201ENSMUST00000206404 149 ntBASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Gm16476-201ENSMUST00000221544 139 ntBASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.87□□□□□ -0.19
Vps39Q8R5L3 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps39Q8R5L3 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Vps39Q8R5L3 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps39Q8R5L3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Vps39Q8R5L3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vps39Q8R5L3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.86□□□□□ -0.19
Vps39Q8R5L3 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vps39Q8R5L3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps39Q8R5L3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps39Q8R5L3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Vps39Q8R5L3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Vps39Q8R5L3 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps39Q8R5L3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps39Q8R5L3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps39Q8R5L3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps39Q8R5L3 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vps39Q8R5L3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.86□□□□□ -0.19
Vps39Q8R5L3 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.86□□□□□ -0.19
Vps39Q8R5L3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps39Q8R5L3 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps39Q8R5L3 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps39Q8R5L3 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps39Q8R5L3 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.86□□□□□ -0.19
Vps39Q8R5L3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps39Q8R5L3 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps39Q8R5L3 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps39Q8R5L3 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vps39Q8R5L3 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Gm24543-201ENSMUST00000103867 82 ntBASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Gm7774-201ENSMUST00000200064 533 ntBASIC13.85□□□□□ -0.19
Vps39Q8R5L3 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.85□□□□□ -0.19
Vps39Q8R5L3 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps39Q8R5L3 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms