Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx54Q8K4L0 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.97■□□□□ 0.47
Ddx54Q8K4L0 Gm8793-201ENSMUST00000183069 1303 ntBASIC17.97■□□□□ 0.47
Ddx54Q8K4L0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx54Q8K4L0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Carlr-201ENSMUST00000181515 2574 ntBASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Gm11439-201ENSMUST00000118598 409 ntBASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Gm3890-201ENSMUST00000182416 207 ntBASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Gm8099-201ENSMUST00000200510 742 ntBASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Gm18212-201ENSMUST00000211678 889 ntBASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx54Q8K4L0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx54Q8K4L0 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx54Q8K4L0 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx54Q8K4L0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx54Q8K4L0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx54Q8K4L0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx54Q8K4L0 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx54Q8K4L0 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Ddx54Q8K4L0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx54Q8K4L0 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx54Q8K4L0 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx54Q8K4L0 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx54Q8K4L0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx54Q8K4L0 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx54Q8K4L0 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx54Q8K4L0 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC17.95■□□□□ 0.46
Ddx54Q8K4L0 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC17.95■□□□□ 0.46
Ddx54Q8K4L0 Gm14028-201ENSMUST00000117434 479 ntBASIC17.95■□□□□ 0.46
Ddx54Q8K4L0 Gm44064-201ENSMUST00000204964 1087 ntBASIC17.95■□□□□ 0.46
Ddx54Q8K4L0 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC17.95■□□□□ 0.46
Ddx54Q8K4L0 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ddx54Q8K4L0 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx54Q8K4L0 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx54Q8K4L0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx54Q8K4L0 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx54Q8K4L0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx54Q8K4L0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 Gm5869-201ENSMUST00000200248 1257 ntBASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 CT009718.3-201ENSMUST00000221116 367 ntBASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx54Q8K4L0 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.93■□□□□ 0.46
Ddx54Q8K4L0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms