Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Gm7222-201ENSMUST00000117512 906 ntBASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf4Q8K4J2 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ebf4Q8K4J2 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ebf4Q8K4J2 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ebf4Q8K4J2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf4Q8K4J2 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms