Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Gm10156-201ENSMUST00000122364 462 ntBASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Gm6152-201ENSMUST00000151704 340 ntBASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Gm7619-201ENSMUST00000210649 1282 ntBASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 AC140406.1-201ENSMUST00000226481 465 ntBASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Gm37466-201ENSMUST00000195692 652 ntBASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Gm43758-201ENSMUST00000199500 367 ntBASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Shtn1Q8K2Q9 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC16.23■□□□□ 0.19
Shtn1Q8K2Q9 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shtn1Q8K2Q9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shtn1Q8K2Q9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shtn1Q8K2Q9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Shtn1Q8K2Q9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shtn1Q8K2Q9 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shtn1Q8K2Q9 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Shtn1Q8K2Q9 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Shtn1Q8K2Q9 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shtn1Q8K2Q9 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC16.23■□□□□ 0.19
Shtn1Q8K2Q9 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shtn1Q8K2Q9 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shtn1Q8K2Q9 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shtn1Q8K2Q9 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.23■□□□□ 0.19
Shtn1Q8K2Q9 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Shtn1Q8K2Q9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shtn1Q8K2Q9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shtn1Q8K2Q9 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shtn1Q8K2Q9 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Shtn1Q8K2Q9 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Shtn1Q8K2Q9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shtn1Q8K2Q9 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC16.22■□□□□ 0.19
Shtn1Q8K2Q9 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shtn1Q8K2Q9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.22■□□□□ 0.19
Shtn1Q8K2Q9 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shtn1Q8K2Q9 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shtn1Q8K2Q9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shtn1Q8K2Q9 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Shtn1Q8K2Q9 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shtn1Q8K2Q9 Gm15808-201ENSMUST00000119046 604 ntBASIC16.22■□□□□ 0.19
Shtn1Q8K2Q9 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shtn1Q8K2Q9 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Shtn1Q8K2Q9 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.22■□□□□ 0.19
Shtn1Q8K2Q9 Gm3961-201ENSMUST00000204425 994 ntBASIC16.22■□□□□ 0.19
Shtn1Q8K2Q9 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms