Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.97□□□□□ -0.17
Clip4Q8CI96 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clip4Q8CI96 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Clip4Q8CI96 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clip4Q8CI96 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clip4Q8CI96 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Clip4Q8CI96 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clip4Q8CI96 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Clip4Q8CI96 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clip4Q8CI96 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Clip4Q8CI96 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clip4Q8CI96 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Clip4Q8CI96 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Clip4Q8CI96 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clip4Q8CI96 Gm13453-201ENSMUST00000118708 357 ntBASIC13.96□□□□□ -0.17
Clip4Q8CI96 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.96□□□□□ -0.17
Clip4Q8CI96 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.96□□□□□ -0.17
Clip4Q8CI96 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Clip4Q8CI96 Gm27533-201ENSMUST00000183800 152 ntBASIC13.96□□□□□ -0.17
Clip4Q8CI96 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.96□□□□□ -0.17
Clip4Q8CI96 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Clip4Q8CI96 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.96□□□□□ -0.17
Clip4Q8CI96 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.96□□□□□ -0.17
Clip4Q8CI96 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clip4Q8CI96 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clip4Q8CI96 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Clip4Q8CI96 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Clip4Q8CI96 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.96□□□□□ -0.18
Clip4Q8CI96 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.96□□□□□ -0.18
Clip4Q8CI96 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Clip4Q8CI96 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Clip4Q8CI96 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Clip4Q8CI96 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Clip4Q8CI96 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Clip4Q8CI96 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.95□□□□□ -0.18
Clip4Q8CI96 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Gm24543-201ENSMUST00000103867 82 ntBASIC13.95□□□□□ -0.18
Clip4Q8CI96 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Gm6222-201ENSMUST00000120787 396 ntBASIC13.95□□□□□ -0.18
Clip4Q8CI96 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.95□□□□□ -0.18
Clip4Q8CI96 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.95□□□□□ -0.18
Clip4Q8CI96 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.95□□□□□ -0.18
Clip4Q8CI96 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.95□□□□□ -0.18
Clip4Q8CI96 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clip4Q8CI96 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clip4Q8CI96 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Clip4Q8CI96 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Clip4Q8CI96 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clip4Q8CI96 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Clip4Q8CI96 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clip4Q8CI96 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Clip4Q8CI96 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clip4Q8CI96 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clip4Q8CI96 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms