Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Rftn2Q8CHX7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.65□□□□□ -0.06
Rftn2Q8CHX7 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rftn2Q8CHX7 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rftn2Q8CHX7 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rftn2Q8CHX7 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rftn2Q8CHX7 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rftn2Q8CHX7 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.65□□□□□ -0.06
Rftn2Q8CHX7 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rftn2Q8CHX7 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Rftn2Q8CHX7 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rftn2Q8CHX7 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rftn2Q8CHX7 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rftn2Q8CHX7 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.07
Rftn2Q8CHX7 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.07
Rftn2Q8CHX7 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Gm17150-201ENSMUST00000165577 381 ntBASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rftn2Q8CHX7 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Rftn2Q8CHX7 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rftn2Q8CHX7 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rftn2Q8CHX7 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rftn2Q8CHX7 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rftn2Q8CHX7 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rftn2Q8CHX7 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rftn2Q8CHX7 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rftn2Q8CHX7 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rftn2Q8CHX7 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rftn2Q8CHX7 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rftn2Q8CHX7 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.62□□□□□ -0.07
Rftn2Q8CHX7 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rftn2Q8CHX7 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rftn2Q8CHX7 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.62□□□□□ -0.07
Rftn2Q8CHX7 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Rftn2Q8CHX7 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rftn2Q8CHX7 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rftn2Q8CHX7 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rftn2Q8CHX7 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms