Protein–RNA interactions for Protein: Q8CGP4

Hist1h2aa, Histone H2A, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aaQ8CGP4 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Acot6-202ENSMUST00000222921 3622 ntBASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Gm13453-201ENSMUST00000118708 357 ntBASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Gm44344-201ENSMUST00000200287 129 ntBASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Hist1h2aaQ8CGP4 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Gm15460-201ENSMUST00000118147 391 ntBASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hist1h2aaQ8CGP4 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.32
Hist1h2aaQ8CGP4 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hist1h2aaQ8CGP4 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hist1h2aaQ8CGP4 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Hist1h2aaQ8CGP4 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hist1h2aaQ8CGP4 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms