Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Ccdc87Q8CDL9 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc87Q8CDL9 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc87Q8CDL9 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc87Q8CDL9 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc87Q8CDL9 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.67□□□□□ -0.06
Ccdc87Q8CDL9 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.67□□□□□ -0.06
Ccdc87Q8CDL9 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc87Q8CDL9 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc87Q8CDL9 Gm2810-201ENSMUST00000118681 990 ntBASIC14.67□□□□□ -0.06
Ccdc87Q8CDL9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Ccdc87Q8CDL9 Gm24158-201ENSMUST00000175263 71 ntBASIC14.67□□□□□ -0.06
Ccdc87Q8CDL9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.67□□□□□ -0.06
Ccdc87Q8CDL9 Gm38225-201ENSMUST00000194001 393 ntBASIC14.67□□□□□ -0.06
Ccdc87Q8CDL9 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc87Q8CDL9 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc87Q8CDL9 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.67□□□□□ -0.06
Ccdc87Q8CDL9 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc87Q8CDL9 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc87Q8CDL9 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc87Q8CDL9 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc87Q8CDL9 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.67□□□□□ -0.06
Ccdc87Q8CDL9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc87Q8CDL9 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc87Q8CDL9 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc87Q8CDL9 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.66□□□□□ -0.06
Ccdc87Q8CDL9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms