Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.99■□□□□ 0.15
Shisa4Q8CA71 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shisa4Q8CA71 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shisa4Q8CA71 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Shisa4Q8CA71 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shisa4Q8CA71 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Shisa4Q8CA71 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Shisa4Q8CA71 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Shisa4Q8CA71 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Shisa4Q8CA71 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.99■□□□□ 0.15
Shisa4Q8CA71 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shisa4Q8CA71 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shisa4Q8CA71 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Shisa4Q8CA71 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shisa4Q8CA71 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shisa4Q8CA71 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shisa4Q8CA71 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Shisa4Q8CA71 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Shisa4Q8CA71 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shisa4Q8CA71 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Gm7446-201ENSMUST00000221035 1240 ntBASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Shisa4Q8CA71 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shisa4Q8CA71 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Shisa4Q8CA71 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Shisa4Q8CA71 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shisa4Q8CA71 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Shisa4Q8CA71 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.97■□□□□ 0.15
Shisa4Q8CA71 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shisa4Q8CA71 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shisa4Q8CA71 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Shisa4Q8CA71 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shisa4Q8CA71 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shisa4Q8CA71 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Shisa4Q8CA71 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Shisa4Q8CA71 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Shisa4Q8CA71 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.97■□□□□ 0.15
Shisa4Q8CA71 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Shisa4Q8CA71 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Shisa4Q8CA71 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.97■□□□□ 0.15
Shisa4Q8CA71 Gm18307-201ENSMUST00000206864 949 ntBASIC15.97■□□□□ 0.15
Shisa4Q8CA71 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shisa4Q8CA71 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.97■□□□□ 0.15
Shisa4Q8CA71 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Shisa4Q8CA71 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shisa4Q8CA71 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Shisa4Q8CA71 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Shisa4Q8CA71 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shisa4Q8CA71 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shisa4Q8CA71 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Shisa4Q8CA71 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.97■□□□□ 0.15
Shisa4Q8CA71 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shisa4Q8CA71 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shisa4Q8CA71 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Shisa4Q8CA71 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shisa4Q8CA71 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shisa4Q8CA71 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Shisa4Q8CA71 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Shisa4Q8CA71 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shisa4Q8CA71 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shisa4Q8CA71 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shisa4Q8CA71 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shisa4Q8CA71 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Shisa4Q8CA71 Gm12416-201ENSMUST00000120911 1008 ntBASIC15.96■□□□□ 0.15
Shisa4Q8CA71 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC15.96■□□□□ 0.15
Shisa4Q8CA71 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.96■□□□□ 0.15
Shisa4Q8CA71 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Shisa4Q8CA71 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shisa4Q8CA71 Gm17330-201ENSMUST00000221047 165 ntBASIC15.96■□□□□ 0.15
Shisa4Q8CA71 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.96■□□□□ 0.15
Shisa4Q8CA71 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.96■□□□□ 0.15
Shisa4Q8CA71 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms