Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Acot6-202ENSMUST00000222921 3622 ntBASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Trim9Q8C7M3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Gm44872-201ENSMUST00000207864 420 ntBASIC15.26■□□□□ 0.03
Trim9Q8C7M3 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim9Q8C7M3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Gm24420-201ENSMUST00000176676 59 ntBASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Gm27989-201ENSMUST00000184721 107 ntBASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.25■□□□□ 0.03
Trim9Q8C7M3 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim9Q8C7M3 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim9Q8C7M3 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim9Q8C7M3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim9Q8C7M3 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim9Q8C7M3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim9Q8C7M3 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim9Q8C7M3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim9Q8C7M3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim9Q8C7M3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim9Q8C7M3 Gm15920-201ENSMUST00000118998 402 ntBASIC15.24■□□□□ 0.03
Trim9Q8C7M3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim9Q8C7M3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim9Q8C7M3 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.24■□□□□ 0.03
Trim9Q8C7M3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim9Q8C7M3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.24■□□□□ 0.03
Trim9Q8C7M3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim9Q8C7M3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trim9Q8C7M3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim9Q8C7M3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim9Q8C7M3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim9Q8C7M3 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim9Q8C7M3 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim9Q8C7M3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim9Q8C7M3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trim9Q8C7M3 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim9Q8C7M3 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim9Q8C7M3 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.24■□□□□ 0.03
Trim9Q8C7M3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trim9Q8C7M3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim9Q8C7M3 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms