Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm6473-201ENSMUST00000188572 1210 ntBASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 Gm18905-201ENSMUST00000205454 928 ntBASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc60Q8C4J0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Gm42872-201ENSMUST00000200026 1967 ntBASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Ldb3-207ENSMUST00000227819 1499 ntBASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc60Q8C4J0 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Gm31326-201ENSMUST00000191856 1048 ntBASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc60Q8C4J0 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 AC168058.1-201ENSMUST00000219521 2282 ntBASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.6■□□□□ 0.41
Ccdc60Q8C4J0 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms