Protein–RNA interactions for Protein: Q8C1M2

Znf428, Zinc finger protein 428, mousemouse

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf428Q8C1M2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Znf428Q8C1M2 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Znf428Q8C1M2 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Znf428Q8C1M2 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Znf428Q8C1M2 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC16.44■□□□□ 0.22
Znf428Q8C1M2 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Znf428Q8C1M2 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Znf428Q8C1M2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Znf428Q8C1M2 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC16.44■□□□□ 0.22
Znf428Q8C1M2 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Znf428Q8C1M2 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC16.44■□□□□ 0.22
Znf428Q8C1M2 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Znf428Q8C1M2 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC16.44■□□□□ 0.22
Znf428Q8C1M2 Itm2b-204ENSMUST00000228637 783 ntBASIC16.44■□□□□ 0.22
Znf428Q8C1M2 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Znf428Q8C1M2 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Znf428Q8C1M2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Znf428Q8C1M2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Znf428Q8C1M2 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Znf428Q8C1M2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Znf428Q8C1M2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.44■□□□□ 0.22
Znf428Q8C1M2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Znf428Q8C1M2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Znf428Q8C1M2 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Znf428Q8C1M2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Znf428Q8C1M2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Znf428Q8C1M2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Znf428Q8C1M2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Znf428Q8C1M2 Gm9333-201ENSMUST00000205452 1323 ntBASIC16.44■□□□□ 0.22
Znf428Q8C1M2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Znf428Q8C1M2 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Gm7029-201ENSMUST00000173226 450 ntBASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Gm38158-201ENSMUST00000194617 339 ntBASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Znf428Q8C1M2 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Znf428Q8C1M2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Znf428Q8C1M2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Znf428Q8C1M2 Gm3756-201ENSMUST00000169182 1355 ntBASIC16.42■□□□□ 0.22
Znf428Q8C1M2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Znf428Q8C1M2 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.42■□□□□ 0.22
Znf428Q8C1M2 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Znf428Q8C1M2 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC16.42■□□□□ 0.22
Znf428Q8C1M2 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC16.42■□□□□ 0.22
Znf428Q8C1M2 Gm42929-201ENSMUST00000198374 1286 ntBASIC16.42■□□□□ 0.22
Znf428Q8C1M2 Gm44608-201ENSMUST00000206827 855 ntBASIC16.42■□□□□ 0.22
Znf428Q8C1M2 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Znf428Q8C1M2 AC073947.2-201ENSMUST00000215888 1130 ntBASIC16.42■□□□□ 0.22
Znf428Q8C1M2 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Znf428Q8C1M2 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC16.42■□□□□ 0.22
Znf428Q8C1M2 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Znf428Q8C1M2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Znf428Q8C1M2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Znf428Q8C1M2 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Znf428Q8C1M2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Znf428Q8C1M2 Gm13730-201ENSMUST00000121036 1462 ntBASIC16.42■□□□□ 0.22
Znf428Q8C1M2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Znf428Q8C1M2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Znf428Q8C1M2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Znf428Q8C1M2 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Znf428Q8C1M2 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Znf428Q8C1M2 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Znf428Q8C1M2 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Znf428Q8C1M2 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Znf428Q8C1M2 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Znf428Q8C1M2 Gm6023-201ENSMUST00000118217 606 ntBASIC16.41■□□□□ 0.22
Znf428Q8C1M2 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Znf428Q8C1M2 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Znf428Q8C1M2 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC16.41■□□□□ 0.22
Znf428Q8C1M2 Gm37489-201ENSMUST00000191883 159 ntBASIC16.41■□□□□ 0.22
Znf428Q8C1M2 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Znf428Q8C1M2 Tyms-ps-201ENSMUST00000219550 915 ntBASIC16.41■□□□□ 0.22
Znf428Q8C1M2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Znf428Q8C1M2 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Znf428Q8C1M2 Nsd1-205ENSMUST00000224693 852 ntBASIC16.41■□□□□ 0.22
Znf428Q8C1M2 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.41■□□□□ 0.22
Znf428Q8C1M2 AC154462.2-201ENSMUST00000227519 370 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms