Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd9Q8BYH8 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Gm12485-201ENSMUST00000119641 291 ntBASIC10.75□□□□□ -0.69
Chd9Q8BYH8 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Gm9211-201ENSMUST00000182882 975 ntBASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Gm27772-201ENSMUST00000184900 187 ntBASIC10.75□□□□□ -0.69
Chd9Q8BYH8 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Gm37728-201ENSMUST00000195025 2292 ntBASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Gm11801-201ENSMUST00000117807 746 ntBASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Gm6630-201ENSMUST00000119199 454 ntBASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Gm42918-201ENSMUST00000199249 1580 ntBASIC10.75□□□□□ -0.69
Chd9Q8BYH8 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Gm14730-201ENSMUST00000122378 1045 ntBASIC10.74□□□□□ -0.69
Chd9Q8BYH8 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd9Q8BYH8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms