Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp2bQ8BJF9 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Gm15467-201ENSMUST00000120582 445 ntBASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp2bQ8BJF9 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 BC001981-202ENSMUST00000191393 1545 ntBASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Rprl2-201ENSMUST00000157150 290 ntBASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Chmp2bQ8BJF9 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms