Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm5566-201ENSMUST00000116118 459 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm25144-201ENSMUST00000179561 110 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm25352-201ENSMUST00000179815 110 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Mir7023-201ENSMUST00000185093 64 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm29310-201ENSMUST00000185468 696 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm21825-201ENSMUST00000185728 696 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm29109-201ENSMUST00000185895 696 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm21896-201ENSMUST00000186520 696 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm21873-201ENSMUST00000186728 696 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm21794-201ENSMUST00000187056 696 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm21880-201ENSMUST00000187275 696 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm21826-201ENSMUST00000187451 696 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm21198-201ENSMUST00000188393 696 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm21749-201ENSMUST00000189343 696 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm21901-201ENSMUST00000189568 696 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm29424-201ENSMUST00000189716 696 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm28599-201ENSMUST00000189838 694 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm21867-201ENSMUST00000189917 696 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm29269-201ENSMUST00000190087 696 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm21722-201ENSMUST00000190153 696 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm28423-201ENSMUST00000190701 696 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm21899-201ENSMUST00000190745 696 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm21910-201ENSMUST00000191163 696 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm21849-201ENSMUST00000191571 696 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm28678-201ENSMUST00000191593 696 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm20910-201ENSMUST00000193268 696 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm21871-201ENSMUST00000194621 696 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm20949-201ENSMUST00000206478 952 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm6888-201ENSMUST00000221983 706 ntBASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Samm50Q8BGH2 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Samm50Q8BGH2 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Gm6222-201ENSMUST00000120787 396 ntBASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Samm50Q8BGH2 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Samm50Q8BGH2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Samm50Q8BGH2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Samm50Q8BGH2 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Samm50Q8BGH2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Samm50Q8BGH2 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Samm50Q8BGH2 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Samm50Q8BGH2 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC16.21■□□□□ 0.19
Samm50Q8BGH2 Gm24543-201ENSMUST00000103867 82 ntBASIC16.21■□□□□ 0.19
Samm50Q8BGH2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Samm50Q8BGH2 Gm13453-201ENSMUST00000118708 357 ntBASIC16.21■□□□□ 0.19
Samm50Q8BGH2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Samm50Q8BGH2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Samm50Q8BGH2 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Samm50Q8BGH2 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC16.21■□□□□ 0.19
Samm50Q8BGH2 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Samm50Q8BGH2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Samm50Q8BGH2 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Samm50Q8BGH2 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Samm50Q8BGH2 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Samm50Q8BGH2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms