Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ubp1Q811S7 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ubp1Q811S7 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ubp1Q811S7 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ubp1Q811S7 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ubp1Q811S7 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ubp1Q811S7 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ubp1Q811S7 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ubp1Q811S7 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.66□□□□□ -0.22
Ubp1Q811S7 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ubp1Q811S7 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ubp1Q811S7 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ubp1Q811S7 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Ubp1Q811S7 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.66□□□□□ -0.22
Ubp1Q811S7 Gm25116-201ENSMUST00000157191 122 ntBASIC13.66□□□□□ -0.22
Ubp1Q811S7 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ubp1Q811S7 Gm27838-201ENSMUST00000184829 128 ntBASIC13.66□□□□□ -0.22
Ubp1Q811S7 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.66□□□□□ -0.22
Ubp1Q811S7 Gm6991-201ENSMUST00000218475 1178 ntBASIC13.66□□□□□ -0.22
Ubp1Q811S7 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ubp1Q811S7 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.66□□□□□ -0.22
Ubp1Q811S7 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ubp1Q811S7 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ubp1Q811S7 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ubp1Q811S7 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Ubp1Q811S7 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ubp1Q811S7 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ubp1Q811S7 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ubp1Q811S7 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ubp1Q811S7 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.65□□□□□ -0.22
Ubp1Q811S7 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Gm14719-201ENSMUST00000121891 340 ntBASIC13.65□□□□□ -0.22
Ubp1Q811S7 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.65□□□□□ -0.22
Ubp1Q811S7 Gm9522-201ENSMUST00000182394 926 ntBASIC13.65□□□□□ -0.22
Ubp1Q811S7 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ubp1Q811S7 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Gm29667-201ENSMUST00000190817 490 ntBASIC13.65□□□□□ -0.22
Ubp1Q811S7 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Ubp1Q811S7 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ubp1Q811S7 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.65□□□□□ -0.22
Ubp1Q811S7 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubp1Q811S7 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubp1Q811S7 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.65□□□□□ -0.22
Ubp1Q811S7 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.23
Ubp1Q811S7 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Ubp1Q811S7 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.64□□□□□ -0.23
Ubp1Q811S7 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.64□□□□□ -0.23
Ubp1Q811S7 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ubp1Q811S7 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms