Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vrk1Q80X41 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vrk1Q80X41 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vrk1Q80X41 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Vrk1Q80X41 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vrk1Q80X41 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vrk1Q80X41 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vrk1Q80X41 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Vrk1Q80X41 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.21□□□□□ -0.3
Vrk1Q80X41 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Vrk1Q80X41 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vrk1Q80X41 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vrk1Q80X41 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vrk1Q80X41 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Vrk1Q80X41 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Vrk1Q80X41 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Gm27486-201ENSMUST00000184923 80 ntBASIC13.2□□□□□ -0.3
Vrk1Q80X41 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Gm8463-201ENSMUST00000208573 613 ntBASIC13.2□□□□□ -0.3
Vrk1Q80X41 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.2□□□□□ -0.3
Vrk1Q80X41 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vrk1Q80X41 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.2□□□□□ -0.3
Vrk1Q80X41 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Vrk1Q80X41 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.2□□□□□ -0.3
Vrk1Q80X41 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vrk1Q80X41 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vrk1Q80X41 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vrk1Q80X41 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vrk1Q80X41 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.19□□□□□ -0.3
Vrk1Q80X41 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vrk1Q80X41 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Vrk1Q80X41 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vrk1Q80X41 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vrk1Q80X41 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vrk1Q80X41 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vrk1Q80X41 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vrk1Q80X41 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Vrk1Q80X41 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.19□□□□□ -0.3
Vrk1Q80X41 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.19□□□□□ -0.3
Vrk1Q80X41 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.19□□□□□ -0.3
Vrk1Q80X41 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.19□□□□□ -0.3
Vrk1Q80X41 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
Vrk1Q80X41 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.19□□□□□ -0.3
Vrk1Q80X41 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vrk1Q80X41 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Vrk1Q80X41 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vrk1Q80X41 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Vrk1Q80X41 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vrk1Q80X41 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vrk1Q80X41 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vrk1Q80X41 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.18□□□□□ -0.3
Vrk1Q80X41 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vrk1Q80X41 Gm12928-201ENSMUST00000117115 573 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms