Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3tc2Q80VA5 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3tc2Q80VA5 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3tc2Q80VA5 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.06■□□□□ 0
Sh3tc2Q80VA5 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Sh3tc2Q80VA5 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sh3tc2Q80VA5 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sh3tc2Q80VA5 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Sh3tc2Q80VA5 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sh3tc2Q80VA5 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sh3tc2Q80VA5 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Gm12882-201ENSMUST00000121696 517 ntBASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Gm15429-201ENSMUST00000151268 798 ntBASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Gm6091-201ENSMUST00000098307 165 ntBASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Gm8775-201ENSMUST00000170943 1327 ntBASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3tc2Q80VA5 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.04■□□□□ -0
Sh3tc2Q80VA5 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Gm15957-201ENSMUST00000118893 974 ntBASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Gm11814-201ENSMUST00000119515 929 ntBASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Gm27847-201ENSMUST00000183711 107 ntBASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Gm27375-201ENSMUST00000183799 107 ntBASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Gm7561-201ENSMUST00000211203 886 ntBASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Gm5425-201ENSMUST00000214125 459 ntBASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Gm8399-201ENSMUST00000082300 1117 ntBASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sh3tc2Q80VA5 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3tc2Q80VA5 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3tc2Q80VA5 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sh3tc2Q80VA5 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sh3tc2Q80VA5 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3tc2Q80VA5 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sh3tc2Q80VA5 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.03■□□□□ -0
Sh3tc2Q80VA5 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Sh3tc2Q80VA5 Gm12928-201ENSMUST00000117115 573 ntBASIC15.03■□□□□ -0
Sh3tc2Q80VA5 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Sh3tc2Q80VA5 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.03■□□□□ -0
Sh3tc2Q80VA5 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3tc2Q80VA5 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Sh3tc2Q80VA5 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3tc2Q80VA5 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Sh3tc2Q80VA5 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.03■□□□□ -0
Sh3tc2Q80VA5 Gm7287-201ENSMUST00000205267 602 ntBASIC15.03■□□□□ -0
Sh3tc2Q80VA5 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.03■□□□□ -0
Sh3tc2Q80VA5 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms