Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1gQ80T11 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1gQ80T11 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1gQ80T11 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ush1gQ80T11 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1gQ80T11 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Ush1gQ80T11 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1gQ80T11 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1gQ80T11 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ush1gQ80T11 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1gQ80T11 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1gQ80T11 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1gQ80T11 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1gQ80T11 Snora78-201ENSMUST00000158630 128 ntBASIC15.11■□□□□ 0.01
Ush1gQ80T11 Gm7067-201ENSMUST00000207698 1249 ntBASIC15.11■□□□□ 0.01
Ush1gQ80T11 Gm45331-201ENSMUST00000209868 554 ntBASIC15.11■□□□□ 0.01
Ush1gQ80T11 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.11■□□□□ 0.01
Ush1gQ80T11 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.11■□□□□ 0.01
Ush1gQ80T11 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1gQ80T11 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1gQ80T11 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1gQ80T11 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1gQ80T11 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1gQ80T11 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1gQ80T11 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1gQ80T11 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1gQ80T11 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.11■□□□□ 0.01
Ush1gQ80T11 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1gQ80T11 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ush1gQ80T11 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Gm13226-201ENSMUST00000117838 404 ntBASIC15.1■□□□□ 0.01
Ush1gQ80T11 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.1■□□□□ 0.01
Ush1gQ80T11 Gm45784-201ENSMUST00000188360 142 ntBASIC15.1■□□□□ 0.01
Ush1gQ80T11 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ush1gQ80T11 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.1■□□□□ 0.01
Ush1gQ80T11 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ush1gQ80T11 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.1■□□□□ 0.01
Ush1gQ80T11 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ush1gQ80T11 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ush1gQ80T11 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ush1gQ80T11 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Ush1gQ80T11 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ush1gQ80T11 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ush1gQ80T11 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ush1gQ80T11 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.09■□□□□ 0.01
Ush1gQ80T11 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ush1gQ80T11 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ush1gQ80T11 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ush1gQ80T11 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ush1gQ80T11 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.09■□□□□ 0.01
Ush1gQ80T11 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.09■□□□□ 0.01
Ush1gQ80T11 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ush1gQ80T11 Gm11814-201ENSMUST00000119515 929 ntBASIC15.09■□□□□ 0.01
Ush1gQ80T11 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ush1gQ80T11 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ush1gQ80T11 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ush1gQ80T11 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ush1gQ80T11 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ush1gQ80T11 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ush1gQ80T11 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ush1gQ80T11 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Ush1gQ80T11 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ush1gQ80T11 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.08■□□□□ 0.01
Ush1gQ80T11 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ush1gQ80T11 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ush1gQ80T11 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ush1gQ80T11 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ush1gQ80T11 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms