Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pif1Q80SX8 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pif1Q80SX8 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Carlr-201ENSMUST00000181515 2574 ntBASIC12.78□□□□□ -0.36
Pif1Q80SX8 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pif1Q80SX8 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.78□□□□□ -0.36
Pif1Q80SX8 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Gm12742-201ENSMUST00000117326 410 ntBASIC12.78□□□□□ -0.36
Pif1Q80SX8 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pif1Q80SX8 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Gm22119-201ENSMUST00000175594 99 ntBASIC12.78□□□□□ -0.36
Pif1Q80SX8 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.78□□□□□ -0.36
Pif1Q80SX8 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.78□□□□□ -0.36
Pif1Q80SX8 Gm6007-201ENSMUST00000208170 823 ntBASIC12.78□□□□□ -0.36
Pif1Q80SX8 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pif1Q80SX8 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.78□□□□□ -0.36
Pif1Q80SX8 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.78□□□□□ -0.36
Pif1Q80SX8 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pif1Q80SX8 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pif1Q80SX8 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pif1Q80SX8 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pif1Q80SX8 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pif1Q80SX8 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pif1Q80SX8 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pif1Q80SX8 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Pif1Q80SX8 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pif1Q80SX8 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pif1Q80SX8 AC107453.4-201ENSMUST00000227068 1817 ntBASIC12.77□□□□□ -0.37
Pif1Q80SX8 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Gm12390-201ENSMUST00000117897 397 ntBASIC12.77□□□□□ -0.37
Pif1Q80SX8 Gm15240-201ENSMUST00000118156 720 ntBASIC12.77□□□□□ -0.37
Pif1Q80SX8 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pif1Q80SX8 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms