Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scaf4Q6PFF0 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 AA543401-201ENSMUST00000164248 1269 ntBASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.64□□□□□ -0.23
Scaf4Q6PFF0 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Gm13823-201ENSMUST00000119930 345 ntBASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Gm18737-201ENSMUST00000173594 937 ntBASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 AA619741-201ENSMUST00000195095 646 ntBASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Gm44719-201ENSMUST00000206404 149 ntBASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Psmb5-202ENSMUST00000227257 622 ntBASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scaf4Q6PFF0 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scaf4Q6PFF0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms