Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn1Q64347 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.49■□□□□ 0.39
Clcn1Q64347 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn1Q64347 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn1Q64347 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn1Q64347 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn1Q64347 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Clcn1Q64347 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn1Q64347 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Clcn1Q64347 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn1Q64347 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn1Q64347 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC17.48■□□□□ 0.39
Clcn1Q64347 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn1Q64347 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn1Q64347 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC17.48■□□□□ 0.39
Clcn1Q64347 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn1Q64347 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Clcn1Q64347 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC17.48■□□□□ 0.39
Clcn1Q64347 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn1Q64347 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn1Q64347 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn1Q64347 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn1Q64347 Mir1247-201ENSMUST00000116706 82 ntBASIC17.48■□□□□ 0.39
Clcn1Q64347 Trav4d-2-201ENSMUST00000120914 335 ntBASIC17.48■□□□□ 0.39
Clcn1Q64347 Gm14730-201ENSMUST00000122378 1045 ntBASIC17.48■□□□□ 0.39
Clcn1Q64347 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC17.48■□□□□ 0.39
Clcn1Q64347 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Clcn1Q64347 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC17.48■□□□□ 0.39
Clcn1Q64347 Gm7498-201ENSMUST00000203282 1084 ntBASIC17.48■□□□□ 0.39
Clcn1Q64347 Gm40466-201ENSMUST00000212174 422 ntBASIC17.48■□□□□ 0.39
Clcn1Q64347 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Clcn1Q64347 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Clcn1Q64347 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Clcn1Q64347 Gm42853-201ENSMUST00000201273 1387 ntBASIC17.48■□□□□ 0.39
Clcn1Q64347 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn1Q64347 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn1Q64347 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn1Q64347 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Clcn1Q64347 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn1Q64347 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn1Q64347 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn1Q64347 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn1Q64347 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Clcn1Q64347 Gm13050-201ENSMUST00000122149 1345 ntBASIC17.47■□□□□ 0.39
Clcn1Q64347 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn1Q64347 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn1Q64347 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn1Q64347 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn1Q64347 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn1Q64347 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn1Q64347 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn1Q64347 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn1Q64347 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn1Q64347 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn1Q64347 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC17.47■□□□□ 0.39
Clcn1Q64347 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC17.47■□□□□ 0.39
Clcn1Q64347 Gm13612-201ENSMUST00000119276 390 ntBASIC17.47■□□□□ 0.39
Clcn1Q64347 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Clcn1Q64347 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Clcn1Q64347 Gm24420-201ENSMUST00000176676 59 ntBASIC17.47■□□□□ 0.39
Clcn1Q64347 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn1Q64347 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn1Q64347 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn1Q64347 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Clcn1Q64347 Gm8399-201ENSMUST00000082300 1117 ntBASIC17.47■□□□□ 0.39
Clcn1Q64347 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn1Q64347 Ankra2-208ENSMUST00000226100 1476 ntBASIC17.47■□□□□ 0.39
Clcn1Q64347 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn1Q64347 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn1Q64347 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn1Q64347 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn1Q64347 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC17.47■□□□□ 0.39
Clcn1Q64347 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Clcn1Q64347 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn1Q64347 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn1Q64347 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn1Q64347 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn1Q64347 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.47■□□□□ 0.39
Clcn1Q64347 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Clcn1Q64347 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clcn1Q64347 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.46■□□□□ 0.39
Clcn1Q64347 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clcn1Q64347 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clcn1Q64347 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.46■□□□□ 0.39
Clcn1Q64347 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clcn1Q64347 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clcn1Q64347 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Clcn1Q64347 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clcn1Q64347 Gm11803-201ENSMUST00000119966 444 ntBASIC17.46■□□□□ 0.39
Clcn1Q64347 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC17.46■□□□□ 0.39
Clcn1Q64347 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Clcn1Q64347 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clcn1Q64347 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Clcn1Q64347 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clcn1Q64347 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clcn1Q64347 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Clcn1Q64347 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Clcn1Q64347 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clcn1Q64347 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Clcn1Q64347 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms