Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
VcanQ62059 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VcanQ62059 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcanQ62059 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcanQ62059 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
VcanQ62059 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcanQ62059 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
VcanQ62059 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.68□□□□□ -0.38
VcanQ62059 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC12.68□□□□□ -0.38
VcanQ62059 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcanQ62059 Gm15131-201ENSMUST00000119124 595 ntBASIC12.68□□□□□ -0.38
VcanQ62059 Gm13665-201ENSMUST00000120830 528 ntBASIC12.68□□□□□ -0.38
VcanQ62059 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
VcanQ62059 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcanQ62059 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VcanQ62059 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcanQ62059 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcanQ62059 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcanQ62059 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.68□□□□□ -0.38
VcanQ62059 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcanQ62059 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcanQ62059 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcanQ62059 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcanQ62059 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.68□□□□□ -0.38
VcanQ62059 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcanQ62059 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcanQ62059 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcanQ62059 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcanQ62059 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
VcanQ62059 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcanQ62059 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcanQ62059 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
VcanQ62059 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.67□□□□□ -0.38
VcanQ62059 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcanQ62059 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
VcanQ62059 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
VcanQ62059 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.67□□□□□ -0.38
VcanQ62059 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
VcanQ62059 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcanQ62059 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.67□□□□□ -0.38
VcanQ62059 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.67□□□□□ -0.38
VcanQ62059 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcanQ62059 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VcanQ62059 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VcanQ62059 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcanQ62059 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcanQ62059 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcanQ62059 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcanQ62059 Gm12795-201ENSMUST00000117594 539 ntBASIC12.67□□□□□ -0.38
VcanQ62059 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.67□□□□□ -0.38
VcanQ62059 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.67□□□□□ -0.38
VcanQ62059 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcanQ62059 Gm8894-201ENSMUST00000074642 666 ntBASIC12.67□□□□□ -0.38
VcanQ62059 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcanQ62059 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcanQ62059 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
VcanQ62059 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
VcanQ62059 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
VcanQ62059 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
VcanQ62059 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
VcanQ62059 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcanQ62059 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcanQ62059 Gm42779-201ENSMUST00000198807 406 ntBASIC12.67□□□□□ -0.38
VcanQ62059 Gm42550-201ENSMUST00000201553 960 ntBASIC12.67□□□□□ -0.38
VcanQ62059 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcanQ62059 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.67□□□□□ -0.38
VcanQ62059 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
VcanQ62059 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
VcanQ62059 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcanQ62059 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcanQ62059 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.66□□□□□ -0.38
VcanQ62059 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 Gm25214-201ENSMUST00000104573 129 ntBASIC12.66□□□□□ -0.38
VcanQ62059 Gm19640-201ENSMUST00000214849 464 ntBASIC12.66□□□□□ -0.38
VcanQ62059 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
VcanQ62059 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC12.66□□□□□ -0.38
VcanQ62059 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.66□□□□□ -0.38
VcanQ62059 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.66□□□□□ -0.38
VcanQ62059 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.66□□□□□ -0.38
VcanQ62059 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcanQ62059 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
VcanQ62059 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.66□□□□□ -0.38
VcanQ62059 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms