Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctr9Q62018 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ctr9Q62018 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ctr9Q62018 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctr9Q62018 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ctr9Q62018 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctr9Q62018 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ctr9Q62018 Gm15678-201ENSMUST00000117573 960 ntBASIC16.3■□□□□ 0.2
Ctr9Q62018 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ctr9Q62018 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.3■□□□□ 0.2
Ctr9Q62018 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ctr9Q62018 Mir7654-201ENSMUST00000185082 70 ntBASIC16.3■□□□□ 0.2
Ctr9Q62018 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctr9Q62018 Gm45384-201ENSMUST00000210451 277 ntBASIC16.3■□□□□ 0.2
Ctr9Q62018 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.3■□□□□ 0.2
Ctr9Q62018 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctr9Q62018 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctr9Q62018 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ctr9Q62018 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctr9Q62018 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctr9Q62018 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ctr9Q62018 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ctr9Q62018 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctr9Q62018 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctr9Q62018 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.29■□□□□ 0.2
Ctr9Q62018 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ctr9Q62018 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctr9Q62018 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctr9Q62018 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctr9Q62018 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Ctr9Q62018 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.29■□□□□ 0.2
Ctr9Q62018 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctr9Q62018 Gm15163-201ENSMUST00000120749 1302 ntBASIC16.29■□□□□ 0.2
Ctr9Q62018 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ctr9Q62018 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ctr9Q62018 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.29■□□□□ 0.2
Ctr9Q62018 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctr9Q62018 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ctr9Q62018 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.29■□□□□ 0.2
Ctr9Q62018 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.29■□□□□ 0.2
Ctr9Q62018 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctr9Q62018 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Ctr9Q62018 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctr9Q62018 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.29■□□□□ 0.2
Ctr9Q62018 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctr9Q62018 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctr9Q62018 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctr9Q62018 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctr9Q62018 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ctr9Q62018 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ctr9Q62018 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctr9Q62018 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
Ctr9Q62018 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctr9Q62018 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctr9Q62018 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ctr9Q62018 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctr9Q62018 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ctr9Q62018 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctr9Q62018 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctr9Q62018 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.28■□□□□ 0.2
Ctr9Q62018 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Ctr9Q62018 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctr9Q62018 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ctr9Q62018 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.28■□□□□ 0.2
Ctr9Q62018 Gm19078-201ENSMUST00000206311 727 ntBASIC16.28■□□□□ 0.2
Ctr9Q62018 Gm5186-201ENSMUST00000218781 920 ntBASIC16.28■□□□□ 0.2
Ctr9Q62018 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.28■□□□□ 0.2
Ctr9Q62018 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ctr9Q62018 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.28■□□□□ 0.2
Ctr9Q62018 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctr9Q62018 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctr9Q62018 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctr9Q62018 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctr9Q62018 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ctr9Q62018 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctr9Q62018 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctr9Q62018 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctr9Q62018 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ctr9Q62018 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctr9Q62018 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctr9Q62018 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ctr9Q62018 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ctr9Q62018 AC164107.1-201ENSMUST00000227730 2161 ntBASIC16.27■□□□□ 0.2
Ctr9Q62018 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctr9Q62018 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctr9Q62018 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.27■□□□□ 0.2
Ctr9Q62018 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctr9Q62018 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctr9Q62018 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Ctr9Q62018 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ctr9Q62018 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctr9Q62018 Gm15376-201ENSMUST00000122258 783 ntBASIC16.27■□□□□ 0.2
Ctr9Q62018 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctr9Q62018 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctr9Q62018 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.27■□□□□ 0.2
Ctr9Q62018 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.27■□□□□ 0.2
Ctr9Q62018 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.27■□□□□ 0.2
Ctr9Q62018 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctr9Q62018 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctr9Q62018 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms