Protein–RNA interactions for Protein: Q61687

Atrx, Transcriptional regulator ATRX, mousemouse

Known RBP Predictions only

Length 2,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtrxQ61687 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.53□□□□□ -0.4
AtrxQ61687 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
AtrxQ61687 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtrxQ61687 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtrxQ61687 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AtrxQ61687 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtrxQ61687 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtrxQ61687 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtrxQ61687 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtrxQ61687 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
AtrxQ61687 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
AtrxQ61687 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.52□□□□□ -0.4
AtrxQ61687 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
AtrxQ61687 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.4
AtrxQ61687 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
AtrxQ61687 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
AtrxQ61687 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
AtrxQ61687 Gm13297-201ENSMUST00000120205 934 ntBASIC12.52□□□□□ -0.4
AtrxQ61687 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
AtrxQ61687 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
AtrxQ61687 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
AtrxQ61687 Gm27331-201ENSMUST00000183705 60 ntBASIC12.52□□□□□ -0.4
AtrxQ61687 Gm21470-201ENSMUST00000187680 696 ntBASIC12.52□□□□□ -0.4
AtrxQ61687 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
AtrxQ61687 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
AtrxQ61687 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
AtrxQ61687 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
AtrxQ61687 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
AtrxQ61687 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
AtrxQ61687 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
AtrxQ61687 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.52□□□□□ -0.4
AtrxQ61687 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
AtrxQ61687 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
AtrxQ61687 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
AtrxQ61687 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtrxQ61687 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtrxQ61687 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtrxQ61687 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtrxQ61687 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AtrxQ61687 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtrxQ61687 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AtrxQ61687 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtrxQ61687 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.52□□□□□ -0.41
AtrxQ61687 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
AtrxQ61687 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
AtrxQ61687 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtrxQ61687 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtrxQ61687 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.52□□□□□ -0.41
AtrxQ61687 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.52□□□□□ -0.41
AtrxQ61687 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.52□□□□□ -0.41
AtrxQ61687 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.52□□□□□ -0.41
AtrxQ61687 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.52□□□□□ -0.41
AtrxQ61687 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtrxQ61687 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtrxQ61687 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtrxQ61687 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtrxQ61687 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtrxQ61687 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AtrxQ61687 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtrxQ61687 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.52□□□□□ -0.41
AtrxQ61687 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtrxQ61687 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtrxQ61687 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtrxQ61687 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AtrxQ61687 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AtrxQ61687 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.51□□□□□ -0.41
AtrxQ61687 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AtrxQ61687 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
AtrxQ61687 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
AtrxQ61687 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.51□□□□□ -0.41
AtrxQ61687 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12.51□□□□□ -0.41
AtrxQ61687 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.51□□□□□ -0.41
AtrxQ61687 Gm38671-201ENSMUST00000200573 130 ntBASIC12.51□□□□□ -0.41
AtrxQ61687 Olfr284-202ENSMUST00000206647 966 ntBASIC12.51□□□□□ -0.41
AtrxQ61687 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AtrxQ61687 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AtrxQ61687 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AtrxQ61687 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.51□□□□□ -0.41
AtrxQ61687 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
AtrxQ61687 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
AtrxQ61687 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
AtrxQ61687 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AtrxQ61687 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AtrxQ61687 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.51□□□□□ -0.41
AtrxQ61687 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AtrxQ61687 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AtrxQ61687 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
AtrxQ61687 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AtrxQ61687 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AtrxQ61687 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
AtrxQ61687 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
AtrxQ61687 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
AtrxQ61687 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
AtrxQ61687 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AtrxQ61687 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
AtrxQ61687 Gm29396-201ENSMUST00000185659 716 ntBASIC12.51□□□□□ -0.41
AtrxQ61687 Gm9540-201ENSMUST00000188230 478 ntBASIC12.51□□□□□ -0.41
AtrxQ61687 Gm29705-201ENSMUST00000212598 474 ntBASIC12.51□□□□□ -0.41
AtrxQ61687 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.51□□□□□ -0.41
AtrxQ61687 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms