Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd1Q61466 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Smarcd1Q61466 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd1Q61466 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd1Q61466 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.39□□□□□ -0.11
Smarcd1Q61466 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd1Q61466 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd1Q61466 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd1Q61466 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd1Q61466 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd1Q61466 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd1Q61466 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd1Q61466 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd1Q61466 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd1Q61466 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd1Q61466 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smarcd1Q61466 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd1Q61466 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.38□□□□□ -0.11
Smarcd1Q61466 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smarcd1Q61466 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.38□□□□□ -0.11
Smarcd1Q61466 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.38□□□□□ -0.11
Smarcd1Q61466 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd1Q61466 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Smarcd1Q61466 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smarcd1Q61466 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Smarcd1Q61466 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd1Q61466 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd1Q61466 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd1Q61466 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smarcd1Q61466 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd1Q61466 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd1Q61466 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd1Q61466 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.37□□□□□ -0.11
Smarcd1Q61466 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd1Q61466 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd1Q61466 Gm5745-201ENSMUST00000183748 313 ntBASIC14.37□□□□□ -0.11
Smarcd1Q61466 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.37□□□□□ -0.11
Smarcd1Q61466 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd1Q61466 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smarcd1Q61466 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smarcd1Q61466 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smarcd1Q61466 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd1Q61466 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd1Q61466 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd1Q61466 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd1Q61466 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd1Q61466 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd1Q61466 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd1Q61466 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Gm15770-201ENSMUST00000117498 584 ntBASIC14.36□□□□□ -0.11
Smarcd1Q61466 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.36□□□□□ -0.11
Smarcd1Q61466 Gm11918-201ENSMUST00000121660 179 ntBASIC14.36□□□□□ -0.11
Smarcd1Q61466 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Gm27701-201ENSMUST00000184498 110 ntBASIC14.36□□□□□ -0.11
Smarcd1Q61466 Gm45384-201ENSMUST00000210451 277 ntBASIC14.36□□□□□ -0.11
Smarcd1Q61466 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd1Q61466 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.36□□□□□ -0.11
Smarcd1Q61466 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms