Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Gm15824-201ENSMUST00000119516 955 ntBASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Shroom1Q5SX79 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.71□□□□□ -0.06
Shroom1Q5SX79 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Shroom1Q5SX79 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Shroom1Q5SX79 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Shroom1Q5SX79 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Shroom1Q5SX79 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Shroom1Q5SX79 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.7□□□□□ -0.06
Shroom1Q5SX79 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.7□□□□□ -0.06
Shroom1Q5SX79 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shroom1Q5SX79 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shroom1Q5SX79 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Shroom1Q5SX79 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Shroom1Q5SX79 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shroom1Q5SX79 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shroom1Q5SX79 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Shroom1Q5SX79 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Shroom1Q5SX79 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shroom1Q5SX79 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shroom1Q5SX79 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.7□□□□□ -0.06
Shroom1Q5SX79 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.7□□□□□ -0.06
Shroom1Q5SX79 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.7□□□□□ -0.06
Shroom1Q5SX79 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shroom1Q5SX79 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.7□□□□□ -0.06
Shroom1Q5SX79 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.7□□□□□ -0.06
Shroom1Q5SX79 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shroom1Q5SX79 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shroom1Q5SX79 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shroom1Q5SX79 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shroom1Q5SX79 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Shroom1Q5SX79 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.7□□□□□ -0.06
Shroom1Q5SX79 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shroom1Q5SX79 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shroom1Q5SX79 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Shroom1Q5SX79 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Shroom1Q5SX79 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Shroom1Q5SX79 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms