Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc85aQ5SP85 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc85aQ5SP85 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc85aQ5SP85 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.23■□□□□ 0.03
Ccdc85aQ5SP85 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ccdc85aQ5SP85 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ccdc85aQ5SP85 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc85aQ5SP85 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Ccdc85aQ5SP85 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 Gm13369-201ENSMUST00000119442 987 ntBASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 Gm4271-201ENSMUST00000174444 973 ntBASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 Itm2b-204ENSMUST00000228637 783 ntBASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc85aQ5SP85 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Gm29199-201ENSMUST00000187766 775 ntBASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Gm29741-201ENSMUST00000192667 421 ntBASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Gm43118-201ENSMUST00000199149 775 ntBASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Gm43758-201ENSMUST00000199500 367 ntBASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Gm6334-201ENSMUST00000207083 228 ntBASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 AC153961.1-201ENSMUST00000217760 385 ntBASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Gm10268-201ENSMUST00000085340 555 ntBASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Efs-202ENSMUST00000227037 2540 ntBASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc85aQ5SP85 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc85aQ5SP85 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc85aQ5SP85 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc85aQ5SP85 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.02
Ccdc85aQ5SP85 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.2■□□□□ 0.02
Ccdc85aQ5SP85 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc85aQ5SP85 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc85aQ5SP85 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc85aQ5SP85 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc85aQ5SP85 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.2■□□□□ 0.02
Ccdc85aQ5SP85 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc85aQ5SP85 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc85aQ5SP85 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc85aQ5SP85 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc85aQ5SP85 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc85aQ5SP85 Mir698-201ENSMUST00000102164 109 ntBASIC15.2■□□□□ 0.02
Ccdc85aQ5SP85 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc85aQ5SP85 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.2■□□□□ 0.02
Ccdc85aQ5SP85 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.2■□□□□ 0.02
Ccdc85aQ5SP85 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ccdc85aQ5SP85 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc85aQ5SP85 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.2■□□□□ 0.02
Ccdc85aQ5SP85 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc85aQ5SP85 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ccdc85aQ5SP85 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc85aQ5SP85 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc85aQ5SP85 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc85aQ5SP85 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc85aQ5SP85 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms