Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm10327-201ENSMUST00000105222 1002 ntBASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm5069-202ENSMUST00000192714 1011 ntBASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm10060-201ENSMUST00000212002 111 ntBASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm15957-201ENSMUST00000118893 974 ntBASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm13597-201ENSMUST00000121239 375 ntBASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm27301-201ENSMUST00000184012 127 ntBASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Mir7071-201ENSMUST00000184847 69 ntBASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms