Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Gm8318-201ENSMUST00000182954 872 ntBASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Matn2-203ENSMUST00000226766 3252 ntBASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Gm37133-201ENSMUST00000192705 1922 ntBASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Gm28386-201ENSMUST00000189147 1849 ntBASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Mir7071-201ENSMUST00000184847 69 ntBASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 AC124569.2-201ENSMUST00000225998 818 ntBASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Gm10313-201ENSMUST00000095320 1002 ntBASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC10.36□□□□□ -0.75
Trav3-3Q5R1C3 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Trav3-3Q5R1C3 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms